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Post by arinbasu on Nov 17, 2017 4:17:03 GMT
Hi All,
I am new to GCTA, and was running the test file. After the first pass, I saw the message (see attached screenshot):
![message](https://imgur.com/a/SuaUY)
``` Note: GRM is computed using the SNPs on the autosome. Reading PLINK FAM file from [test.fam]... 3925 individuals to be included from [test.fam]. Reading PLINK BIM file from [test.bim]... 1000 SNPs to be included from [test.bim]. Computing the genetic relationship matrix (GRM) ... Subset 1/1, no. subject 1-3925 3925 samples, 1000 markers, 7704775 GRM elements IDs for the GRM file has been saved in the file [test.grm.id] Segmentation fault (core dumped) ``` I could not run GCTA successfully afterwards as it did not create the GRM files.
What is the solution?
I am running GCTA 1.91_0beta version on a Linux box with 32 GB RAM.
Kind Regards, Arindam Basu
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Post by zhilizheng on Nov 29, 2017 3:17:46 GMT
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