luba
New Member
Posts: 4
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Post by luba on Feb 17, 2014 13:23:09 GMT
I am trying to calculate GRM per chromosome to run mixed models for GWAS. I am having trouble to get the matrix for large chromosomes. Could you please any one give an estimate of how much RAM will I need to calculate for example GRM for 11000 individuals and 2Million SNPs? Is there any alternative to run such analysis? Please mind that I run the analysis in a linux server 64bits on 4 nodes. Regards, Luba
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Post by Jian Yang on Feb 20, 2014 8:20:29 GMT
You can break analysis down further to chunks of the chromosome and combine the GRMs.
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