
Post by Daniel_04 on May 15, 2020 7:40:57 GMT
Hello,
Sorry if this is a very beginner's question, but in the formula to obtain the sampling covariance between SMR betas estimated at two SNPs in LD, is the LD correlation measure used r or r2?
Thanks,
Daniel


ax
New Member
Posts: 27

Post by ax on Jun 22, 2020 11:10:05 GMT
Hi Daniel,
Are you referring to the equation (9) in the SMR paper?
If so, the LD correlation measure used is r.
Cheers, Angli

