Post by KHN on Jul 1, 2021 4:29:29 GMT
Hello,
Regarding the input file for Bivariate GREML, I have a question.
For --pheno, how to create a file? For GREML analysis, we just created a file as below as it is only for one phenotype.
ID sampleID affect
1 1 0
2 2 1
3 3 1
etc...
For phenotype file for reml-bivar, what is the usual format? As I am calculating genetic correlations between two traits, so should I make like this?
1 1 0
2 2 1
3 3 1
...
...
10003 10003 2
10004 10004 3
10005 10005 2
...
...
Thank you in advance
Regarding the input file for Bivariate GREML, I have a question.
For --pheno, how to create a file? For GREML analysis, we just created a file as below as it is only for one phenotype.
ID sampleID affect
1 1 0
2 2 1
3 3 1
etc...
For phenotype file for reml-bivar, what is the usual format? As I am calculating genetic correlations between two traits, so should I make like this?
1 1 0
2 2 1
3 3 1
...
...
10003 10003 2
10004 10004 3
10005 10005 2
...
...
Thank you in advance