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Post by Fab on May 28, 2014 10:16:42 GMT
Hello. Reading the GCTA documents and forum, it is not clear to me whether GCTA uses dosage data directly or transforms dosage in genotypes and then perform procedures on genotype values. Could you please confirm that all the GCTA procedures that accept mach format in input do work on continuous dosage data? Thank you in advance, regards, Fab.
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Post by Jian Yang on Jun 5, 2014 11:46:09 GMT
You can use dosage data in some of the analyses, e.g. --make-grm, but not all.
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