Post by caramado on Sept 23, 2016 10:42:04 GMT
Hi!
I have created a GRM in plain text format (grm.gz). It is very big (N=60,000 ind), but it looks fine and has the corresponding number of entries. When I run GCTA, the program reads the id file and displays the correct number of individuals, but when it gets to read the grm.gz file it gives me the following error:
> Error: there are 0 lines in the [/grm/G.grm.gz] file. The expected number of lines is -773621627.
Two things bother me. First, there are more than 0 lines in the matrix, but also it says that the expected number is negative.
I though it might be a problem with the memory, but I'm using a large node and I still receive the same error.
Can you help me with this? Thanks in advance!
C
I have created a GRM in plain text format (grm.gz). It is very big (N=60,000 ind), but it looks fine and has the corresponding number of entries. When I run GCTA, the program reads the id file and displays the correct number of individuals, but when it gets to read the grm.gz file it gives me the following error:
> Error: there are 0 lines in the [/grm/G.grm.gz] file. The expected number of lines is -773621627.
Two things bother me. First, there are more than 0 lines in the matrix, but also it says that the expected number is negative.
I though it might be a problem with the memory, but I'm using a large node and I still receive the same error.
Can you help me with this? Thanks in advance!
C
