Questions about estimating genetic relatedness

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elsalu2015
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Questions about estimating genetic relatedness Feb 27, 2015 1:23:46 GMT

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Post by elsalu2015 on Feb 27, 2015 1:23:46 GMT

Hello, everyone,

I have a question about the snps which are used to estimate the genetic relatedness,
So should I use the whole snp set or only the neutral snps or intergenic snps for estimating the genetic relationship matrix?
Any input appreciated,

Thanks,

Zhihong Zhu Moderator Posts: 88	Questions about estimating genetic relatedness Feb 28, 2015 8:46:24 GMT Quote Select Post Deselect Post Link to Post Member Give Gift Back to Top Post by Zhihong Zhu on Feb 28, 2015 8:46:24 GMT Hi, Either SNP set is OK. The only difference is the interpretation, ie. genetic variation explained by all the SNPs or intergenic SNPs. Cheers, Zhihong

Questions about estimating genetic relatedness

Post by elsalu2015 on Feb 27, 2015 1:23:46 GMT

Post by Zhihong Zhu on Feb 28, 2015 8:46:24 GMT