Project other populations onto PCs

lhooq New Member Posts: 2	Project other populations onto PCs Jul 8, 2015 21:29:22 GMT Quote Select Post Deselect Post Link to Post Member Give Gift Back to Top Post by lhooq on Jul 8, 2015 21:29:22 GMT Is it possible to compute principal components using only a subset of populations and project other populations onto those principal components using GCTA, similar to the -w flag in smartpca?

Zhihong Zhu Moderator Posts: 88	Project other populations onto PCs Jul 29, 2015 6:35:56 GMT Quote Select Post Deselect Post Link to Post Member Give Gift Back to Top Post by Zhihong Zhu on Jul 29, 2015 6:35:56 GMT Hi there, I'm afraid GCTA can estimate PCs but not projection. Cheers, Zhihong