Numeric Coding

For some of the downstream analysis, I need to know how SNP table (BED file) is recoded by GCTA. By looking at the source code, I can tell it is 11 for major allele and 00 for minor allele but I still would like to verify this with you before i proceed.



Source Code: github.com/cooljeanius/gcta/blob/master/data.cpp, Line 176



I appreciate if someone can reply,



Thanks