Post by codecat on Jul 16, 2021 3:04:53 GMT
Hi,
I am trying to calculate heritabilities using family data. Currently, I have a grm for 22 chromosomes and a kinship matrix. Then I followed the tutorial on cnsgenomics.com/software/gcta/#GREMLinfamilydata but I was confused that there was not much clue about how the kinship matrix should be applied into the gcta64 command. If it is stored in as a Rdata, should I change it into other format so that it could be applied into the command?
Thanks in advance!
I am trying to calculate heritabilities using family data. Currently, I have a grm for 22 chromosomes and a kinship matrix. Then I followed the tutorial on cnsgenomics.com/software/gcta/#GREMLinfamilydata but I was confused that there was not much clue about how the kinship matrix should be applied into the gcta64 command. If it is stored in as a Rdata, should I change it into other format so that it could be applied into the command?
Thanks in advance!