mocha
New Member
Posts: 2
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Post by mocha on Aug 25, 2022 13:34:26 GMT
Hello.
I am generating the GRM by the following codes:
${gcta} --mbgen ${ukb_bgen_list} \ --sample ${ukb_sample_file} \ --extract ${model_snp} \ --keep ${EUR_list} \ --make-grm-part 100 ${job_id} \ --thread-num 24 \ --out ${output_path}UKB_GRM_parts .
However, I am getting the following error:
"Error: decompressing genotype data error in 0th SNP of [/mnt/e/ukbgwas/impbgen/ukb_imp_chr1_v3.bgen]."
Could you please tell me the cause and solution? Thank you very much.
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