Post by weihuameng2 on Mar 24, 2023 9:38:59 GMT
Dear GCTA:
Hi. I have a sub population of 180,000 samples. As suggested by GCTA, i divided the dataset into 6 parts to generate a GRM file.
Then, when I tried to use this commands to generate top 10 PC.
gcta64 --grm test --pca 10 -- thread 10 --out test, it indicated not enough resource in the HPC (bad allocation or something like that).
I am wondering if you have any suggestions that I can generate the 10 PC?
Thank you.
Weihua
Hi. I have a sub population of 180,000 samples. As suggested by GCTA, i divided the dataset into 6 parts to generate a GRM file.
Then, when I tried to use this commands to generate top 10 PC.
gcta64 --grm test --pca 10 -- thread 10 --out test, it indicated not enough resource in the HPC (bad allocation or something like that).
I am wondering if you have any suggestions that I can generate the 10 PC?
Thank you.
Weihua