Post by Huang on Feb 29, 2024 9:38:43 GMT
GWAS summary data of 19288010 SNPs to be included from [gwas.txt].
Reading eQTL SNP information from [./eqtl线/eqtl.esi].
8932843 SNPs to be included from [./eqtl线/eqtl.esi].
Reading PLINK FAM file from [./g1000_eur/g1000_eur.fam].
503 individuals to be included from [./g1000_eur/g1000_eur.fam].
Reading PLINK BIM file from [./g1000_eur/g1000_eur.bim].
8550156 SNPs to be included from [./g1000_eur/g1000_eur.bim].
Checking the consistency of the alleles of each SNP between pairwise data sets (including the GWAS summary data, the eQTL summary data and the LD reference data).
Killed
Reading eQTL SNP information from [./eqtl线/eqtl.esi].
8932843 SNPs to be included from [./eqtl线/eqtl.esi].
Reading PLINK FAM file from [./g1000_eur/g1000_eur.fam].
503 individuals to be included from [./g1000_eur/g1000_eur.fam].
Reading PLINK BIM file from [./g1000_eur/g1000_eur.bim].
8550156 SNPs to be included from [./g1000_eur/g1000_eur.bim].
Checking the consistency of the alleles of each SNP between pairwise data sets (including the GWAS summary data, the eQTL summary data and the LD reference data).
Killed